CDS
| Accession Number | TCMCG065C23542 |
| gbkey | CDS |
| Protein Id | XP_022683986.1 |
| Location | join(3867815..3868115,3868475..3869120,3869368..3869518,3870451..3870534,3871210..3871384,3871739..3871943,3872284..3872371,3872449..3872574,3881200..3881226,3881371..3881442,3887946..3888052,3888658..3888791,3888974..3889196,3890260..3890515,3895822..3895976,3896762..3896909,3897181..3897334,3898467..3898633,3898761..3899006) |
| Gene | LOC101778059 |
| GeneID | 101778059 |
| Organism | Setaria italica |
Protein
| Length | 1154aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA207554 |
| db_source | XM_022828251.1 |
| Definition | probable RNA-dependent RNA polymerase 3 isoform X2 [Setaria italica] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | RNA dependent RNA polymerase |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGCAGCGTCCCGGCCCGTCTCAGGCGGCGCCCCTGCCGCCGGCGGTGGCCGCGGAGCTCGCGCAGCTCGAGCGGAGGCTGGGGCAGGTCGCCGAGGAACGGGCGCGCCGCGAGCTTGGGGCGCTCGGCGAAGCCCCGGCGGTCCGCGTGCTGCGGAAGATCGGGGGGTCCCAGCGGGAGGTCCGGACGCTCACCGGCTACATCATCACGGTCGCCAGGCAGGAGGCGTACGCGCTCAACGCGCTGGCCGTACCCACCGCCGAGAGCGCCGCCTGCTGCTCCTCCGCTCCTTCCCAGAGAGATGAATCTGTACATGGACCGCAGTACCACAATGACGTCCAAATGGAAGAAATAGCTTCGGACCTCTCGAACCATTGCATGGTGATGGACGAGAGTCAAGGTCAGGAGGGTTTTCCGGTGATGATGGCAGTTGACAACCCATCTGATTGCATCTCCCCAAGGGATTGGAACCAGGATCGCATTGAAGTTGATAACGTTGCCCCACCAATGGCTTCTCAGGCAAACCAGATGCCTATGCAGTATGATGACAGTATCCAAGAACTGATTTCCATTGCACCACATGGTGTTATGATGCTGGCTGAAAATCCTGGAAATGGCAGATCATCTGAGATGTGGAACCACACACAGACTGATAGCCCCAAGCACGAGATGGTTCCTACACATCCAAGAAGTGAATCCACCTCAAGCCGCTTGCAGCACTGTTTAAGATGTCTTCAGGGAGTTGGACCCTATGGATTCCATCTGGGCCCAGAGTGTGCAATAATGCTACAAAAGCCCGTGCCGAATCTTGATGCAGAAAATGCATTCAGGAAGGCAGCAAGCCCTCATATCACTAATGAATTGAGGAAGACGGCAAGCCCTCAGATGTGGGCGCTGGAGGATTTGGAGTTCTGCAGGAGATTTTTGATACTATCGTATCTTTGTCAGAATAACATGGAAGATGAAGCTGTACTGACCGTGGACTATATTAAATCGTTGAAGTTTCTGTCCATTGCTCATTTTGAGTCCGAAATTTGGAGCAAATTCGGCCGGAAGAATTTTCAGGCATCCAATAGAACTGCATCAGATAGGCCAAAGAATCTTGATTTGGACCCAAGTAAAACAAAAGTATACCATTGTAATATTGAGATAAGAGGGGATTCCGTATTCTATGTTTTGAAGGGGCCATATATGGAGAATAAGAGGACTTACCTTCAGAAAGTTCTTGGTGATGATAACGTTCTTGTAGTAAAGTTTATGGTTCCTTCAGACACCAATGCTGATTTCTACCGCCAACTCTACCATAAGGTTGCTGAAGATGGTATTGTTTTGGGTCTGCGGCGATATCGTTTTATCGCTTACAAGGATGGAGCAAATGAGAAGAAAAAGAAAGACGATGGACAAGGGGAAATCAAGAAATGCACTTCATCTGTTAGGTGCTACTTTGTTTGCACTGAGTCGGTGGATGAGACTTATATTCTCTCCAACAAAACAGTTGGTCAGTGCCGCAAACTGTTCATGGATATCCATACCGCTCCCACCTTGCCAAATTATATGAAAAGGTTTTCGTTGATACTATCCAAAACTGTAACACTGGAAGTTGATTTATCGACAGTTAATGTTATACTGATTGATGATGAACCTTGCCGGAATGAACATGGGAAAGTTGTTATTGAAGATGGGAAACGTTGGATCCATACTGATGGTACTGGCTTCATATCTGAAAATTTGGCTAAGAAATGCCCCAACAGAATTATCTCCGGAAAGAAGTCAAAAGATTATATGCATCGAGGTGAAACAATGCCTCTTCTCATGCAGGTCCGTCTTTTTTATAATGGATATGCTGTAAAAGGAACTCTACTAGTTGACAAAAGGCTTCAAGATGATACTATTGTTATCCGACCATCAATGGTAAAAGTAAAAGCTGATCCAAAGTTGTCCTGGTTGCAGTCTCTCAGTTCTTTGGAAATAGTTTCCACGAGGACATCAACATCAAGGACCTTGATTTCACTTCTTCATTATGGAGGTGTTAAGGCGGAATATTTTATGGAACTTCTACATAATGCAATTGAAGGGGTTGCGAATGCTTGTTATGATTTCAGACACGCACTAAAGCTTGCCTCTAGATACGCTAATATGGAGGATTCAATGTTGGAGCAAATGATTCATTCTGGAATTCCACTAGAAGAGCCATACTTGCTATCTAGACTGAATTTCATAGCCAAACAGGAAATGAAAGGTTTCAGAGAAGGAAAGCTACCAATTGATGAATGCTATCATTTGATGGGTTCAACAGATCCTACAGGAACGTTGAAACCAAATGAAGTTTGCGTGATACTTGATAGTGGCCAATACTCTGGAGATGTGCTTGTGTTTAAATATCCTGGTCTCCATTTCGGTGATATACACATCTTAACTGCAAGGCAAATTAGCGGACTTGAGAAGAATTTTGTTGGATATTCAAAAAATGCAATACTTTTCCCTACTTCTGGTAAACGATCATTGGCTGATGAGATGGCCAACAGTGATTTTGATGGTGACGAGTACTGGGTCTCAAAAAACCACATGGTCAGTTCATTTCGGTTTTCATTTTATCTACTAAAGGGCTTCACGAAGCGAAGTGAACCTTGGGTTCCACTATTCAAACCAAAGGAGACCCAGCACAAGCCTAAGAGACCCAAGGATTTTAATGAATCAGTTCTTGAAAGAGTGCTATTTAATGAATGCTTGACGACGACGTTTATATCCAATTATGCACTTGGTATATCGTCTGATTGTTGGTTAGCATATATGGACCGGCTCTTAACAGAAGATGTTGATGAAGACGAAAAGGAATCAATTGCGAAGAAGATGATTAAATTAGTTAACCTTTATTATTGGGCTCTGGATGGGCATAAGATAAAAGTTGATCGTGAATTGAGGGTAGAAAAATATCCACACTTTATGGAGAAAAAAGGATTTGAATCCTACCATTCGATATCTATATTGGGCAGAATCTTCGATGAGACTGAGAAAGCAATATTGCAACGATCTGAGGATGATAAACAAATTCAGATAACGATGCTGCCATTCTTCACTGAGGTGGAGGCAGCCCCAGAATGCATATCATTATGGGAGTACAACTACGAAGAGTACTTGAGTAAGAGTAGGGGACTTTTTGATCTGGATAAAGAAGAAAAGAACGAGGAGTTTGAAAAACTCTACCAAAGCTATAAACATTTGCTCTATGATGCCGAAGAATTCGAAGAAACCTCGCGGGACCTCTCCCAGGTGTACATGGAGGCCTGCGCGATTTACCGGATCGTCTACGAGCGAGCAAGGTCTACCAAGAGCATCAGCAAGTGCCGCTTCGTGTGGGTGGTCGCCGGAGCCGCGCTGTGCCATCTCTACGCAACGAAGTATGCGGCGCAGCGTGGGGAAAAAACCGTGCTCTGCCCGCTTTCAGTTACCCGCCAACTTTACTGA |
| Protein: MQRPGPSQAAPLPPAVAAELAQLERRLGQVAEERARRELGALGEAPAVRVLRKIGGSQREVRTLTGYIITVARQEAYALNALAVPTAESAACCSSAPSQRDESVHGPQYHNDVQMEEIASDLSNHCMVMDESQGQEGFPVMMAVDNPSDCISPRDWNQDRIEVDNVAPPMASQANQMPMQYDDSIQELISIAPHGVMMLAENPGNGRSSEMWNHTQTDSPKHEMVPTHPRSESTSSRLQHCLRCLQGVGPYGFHLGPECAIMLQKPVPNLDAENAFRKAASPHITNELRKTASPQMWALEDLEFCRRFLILSYLCQNNMEDEAVLTVDYIKSLKFLSIAHFESEIWSKFGRKNFQASNRTASDRPKNLDLDPSKTKVYHCNIEIRGDSVFYVLKGPYMENKRTYLQKVLGDDNVLVVKFMVPSDTNADFYRQLYHKVAEDGIVLGLRRYRFIAYKDGANEKKKKDDGQGEIKKCTSSVRCYFVCTESVDETYILSNKTVGQCRKLFMDIHTAPTLPNYMKRFSLILSKTVTLEVDLSTVNVILIDDEPCRNEHGKVVIEDGKRWIHTDGTGFISENLAKKCPNRIISGKKSKDYMHRGETMPLLMQVRLFYNGYAVKGTLLVDKRLQDDTIVIRPSMVKVKADPKLSWLQSLSSLEIVSTRTSTSRTLISLLHYGGVKAEYFMELLHNAIEGVANACYDFRHALKLASRYANMEDSMLEQMIHSGIPLEEPYLLSRLNFIAKQEMKGFREGKLPIDECYHLMGSTDPTGTLKPNEVCVILDSGQYSGDVLVFKYPGLHFGDIHILTARQISGLEKNFVGYSKNAILFPTSGKRSLADEMANSDFDGDEYWVSKNHMVSSFRFSFYLLKGFTKRSEPWVPLFKPKETQHKPKRPKDFNESVLERVLFNECLTTTFISNYALGISSDCWLAYMDRLLTEDVDEDEKESIAKKMIKLVNLYYWALDGHKIKVDRELRVEKYPHFMEKKGFESYHSISILGRIFDETEKAILQRSEDDKQIQITMLPFFTEVEAAPECISLWEYNYEEYLSKSRGLFDLDKEEKNEEFEKLYQSYKHLLYDAEEFEETSRDLSQVYMEACAIYRIVYERARSTKSISKCRFVWVVAGAALCHLYATKYAAQRGEKTVLCPLSVTRQLY |